NAMD Molecular Dynamics
Elementary tutorial for carrying out molecular dynamics simulations Pre-requisite: Basic knowledge about Molecular simulations
Towhee Monte Carlo Simulations
Elementary tutorial for carrying out monte carlo simulations Pre-requisite: Basic knowledge about Molecular simulations
Packmol Molecular Simulation
General guidelines for generating or creating the initial configuration for your molecular simulation run Pre-requisite: Basic knowledge about Molecular simulations
Viscosity Property calculation
Insights on calculating the viscosity of a system using the Green-Kubo approach Pre-requisite: Sound coding skills, idea about correlation functions
Gold Nanoparticles Initial Structure
Insights on generating gold nanoparticle structures for your next simulation Pre-requisite: None
Advanced Packmol Molecular Simulation
Advanced guidelines for creating a nanotube+graphene cage to apply electric field Pre-requisite: Deftness with packmol (refer packmol tutorial)
Amber Molecular Simulation
Elementary tutorial for carrying out molecular dynamics simulations Pre-requisite: Basic knowledge about Molecular simulations