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# | Aptamer Name | Aptamer Target (General) | Aptamer Target (Specific) | Length | Affinity | Buffer | GC Content | Sequence | Reference |
---|---|---|---|---|---|---|---|---|---|
91 | Arsenic(III) (Ars-3) | Small Organic | Arsenic(III) | 100 | 4.95 nM | Selection buffer: 150 mM NaCl, 50mM HEPES, 0.5 mM MgCl2, 0.5 mM CaCl2 | 42.00% | 5'-GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT-3' | Kim, et al. "Arsenic Removal from Vietnamese Groundwater Using the Arsenic-Binding DNA Aptamer." Environ. Sci. Technol., 43 (2009): 9335-9340. |
92 | HGF (H38-15) | Protein | Human Hepatocyte Growth Factor | 102 | 19 nM | Binding Buffer (PBS containing 1 mM MgCl2) | 55.88% | 5'-AGATGCCTGTCCAGCATCGAGCGCCAGCTTTGCTGATGGGTGGCCACCCTTGCCCTGGGTTTGAATTTCGATCCTATCGGTAGCTAGACTGCTTTGTCCTCG-3' | Saito, Takesh et al. "Generation of Inhibitory DNA Aptamers Against Human Hepatocyte Growth Factor." DNA and Cell Biology, 24 (2005): 624-633. |
93 | Sialyllactose (Sl-11) | Other | Sialyllactose | 102 | 4.9 µM | Binding Buffer (50 mM Tris-HCl (pH 7.6), 250 mM NaCl, 5 mM MgCl2) | 56.86% | 5'-GTACGAATTCACGAGGTTGCCAGCGGGGCCAGCCACTTCTGTCAGTGAATTCCTGCTCGTATATCTACTCGCCCGCCTGCGAGCATGGAGTCGGATCCTCTA-3' | Masud, M, et al. "Sialyllactose-binding modified DNA aptamer bearing additional functionality by SELEX." Bioorganic & Medicinal Chemistry, 12 (2004): 1111-1120 |
94 | Hematoporphyrin IX | Small Organic | Hematoporphyrin IX (HPIX) | 102 | 1.6 µM | Selection Buffer: 100 mM Tris–acetate (pH 8.0), 200 mM sodium acetate, 50 mM potassium acetate, 25 mM magnesium acetate, 5% dioxane | 66.67% | 5'-TAGGGAATTCGTCGACGGATCCCAATGGGGTCGGGCGGGCCGGGTGTCATGGTGGACGGAGATGGGACGTAGAGGGCGGTCTGCAGGTCGACGCATGCGCCG-3' | A Okazawa, A Kobayashi, et al. (2000) In vitro selection of hematoporphyrin binding DNA aptamers. Bioorg Med Chem Lett. 10:2653-2656. |
95 | ` | Other | Chitin | 105 | N/A nM | Binding buffer: 100mM NaCl, 100 mM KCl, 5 mM MgCl2, 50 mM Tris-acetate (pH 8.0) | 60.00% | ||
96 | Advanced Glycation End Products (Clone 9) | Protein | Advanced Glycation End products (AGE) | 106 | 1 pM | N/A | 48.11% | 5'-AGCTCAGAATGGATCCAAACGCTCATAACTCACTCCATACTCACTTGCTGATTCGCCAACAACACACCCTTAAACAGTCCCTTCGACATGAGAATTCGGCCGGATC-3' | Higashimoto, Y., et al. "In vitro selection of DNA aptamers that block toxic effects of AGE on cultured retinal pericytes." Microvascular Research, 74 (2007): 65-69. |
97 | Anterior Gradient Homolog 2 (C14B0) | Protein | Anterior Gradient Homolog 2 (AGR2) | 108 | 8.5 nM | Binding Buffer: PBS with 137 mM NACl, 2.7 mM KCl, 10 mM Na |
63.89% | 5'-TCTCGGACGCGTGTGGTCGGCGGGTGGGAGTTGTGGGGGGGGGTGGGAGGGTTCTTTGTTTGATCTTTCTCGCTGCCTGGCCCTAGAGTGTCGCTGCCTGGCAGAGTG-3' | Wu et al. "Identification, Characterization and Amplification of a G-Quadruplex Structured DNA Aptamer Against Cancer Biomarker Protein Anterior Gradient Homolog 2." PLOS, 9 (2012):e46393 |
98 | Bisphenol A(#3) | Small Organic | Bisphenol A(BPA) | 109 | 8.3 nM | Binding buffer: 25 mM Tris-HCL, 100 mM NaCl, 25 mM KCl, 10 mM MgCl2, and 5.0% DMSO (pH 8.0) | 63.30% | 5'-GGGCCGTTCGAACACGAGCATGCCGGTGGGTGGTCAGGTGGGATAGCGTTCCGCGTATGGCCCAGCGCATCACGGGTTCGCACCAGGACAGTACTCAGGTCATCCTAGG-3' | Jo et al. "Development of Single-Stranded DNA Aptamers for Specific Bisphenol A Detection." Oligonucleotides, 21(2011): 85-91. |
99 | 8-OHdG (22) | Other | 8-OHdG | 121 | 0.1 nM | 50 mM Tris–HCl (pH 7.6), 300 mM NaCl, 30 mM KCl, and 5 mM MgCl2 | 63.64% | 5'-TAATACGACTCACGTATAGGGAATTCGTCGACGGATGCGGGCGATCGGCGGGGGGTGCGTGCGCTCTGTGCCAGGGGGTGGGACAGATCATATGGGGGTGCTCAGGTCGACGCATGCGCCG-3' | Miyachi, Y. (2009). Selection of a dna aptmaer that binds 8-ohdg using gmp-agarose. Bioorganic & Medicinal Chemistry Letters, 19(2009), 3619-3622. |
100 | Crude Extracellular Mixture of E. coli - cis | Protein | Crude Extracellular Mixture (CEM) of E. coli | 125 | N/A nM | Selection Buffer (50 mm HEPES (pH 7.5), 150 mM NaCl, 15 mM MgCl2, and 0.01% Tween 20), r.t. | 52.80% | 5'-CACGGATCCTGACAAGGATGTGTGCGTTGTCGAGACCTGCGACCGGAACACTACACTGTGTGGGATGGATTTCTTTACAGTTGTGTGCAGCTCCGTCCGACTCTTCCTAGC{Internal/Fluorescein-dT}A{Internal/Dabcyl-dT}GGTTCGATCAAGA-3' | Ali et al. "Fluorogenic DNAzyme Probes as Bacterial Indicators." Angewandte Chemie International Edition, 50 (2011): 3751-3754. |