To Upload your aptamers in our database
For LOGIN
# | Aptamer Name | Aptamer Target (General) | Aptamer Target (Specific) | Length | Affinity | Buffer | GC Content | Sequence | Reference |
---|---|---|---|---|---|---|---|---|---|
371 | HIV-1 Integrase (P5) (ID# 129) | Protein | HIV-1 Integrase | 77 | 10 nM | Buffer A (50 mM HEPES, 1 mM DTT, 1 mM APMSF) Binding Buffer (50 mM Na-HEPES (pH 7.5), 250 mM NaCl, 2 mM DTT, 10 mM MnCl2, 5 mM CHAPS) | 54.55% | 5' GGGAGCUCAGAAUAAACGCUCAACCAGUCUUGUGGCUUUGAAAGAGAGGAGUGUUCGACAUGAGGCCCGGAUCCGGC 3' | Allen, P., et al. "Isolation of High-Affinity RNA Ligands to HIV-1 Integrase from a Random Pool." Virology, 209(1995): 327-336. |
372 | Rev Peptide (ID# 258) | Peptide | Rev Peptide | 77 | 18 µM | Buffer (50 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2) | 59.74% | 5' GGACCUCGGCGAAAGCCGGUAACGCCACAAGUCGGAGGGUAAGAUCUGACAGGAACUGGGUGACGGAGGUUAGGUGC 3' | Hesselberth et al. "Simultaneous detection of diverse analytes with an aptazyme ligase array." Analytical Biochemistry, 312(2003): 106-112. |
373 | HIV-1 Rev Peptide (L1-Rev) (ID# 413) | Peptide | HIV-1 Rev Peptide | 77 | 18 µM | Reaction buffer: 20 mM Tris-HCl, pH 7.5, 50 mM NaCl, and 60 mM MgCl2 | 59.74% | 5' GGACCUCGGCGAAAGCCGGUAACGCCACAAGUCGGAGGGUAAGAUCUGACAGGAACUGGGUGACGGAGGUUAGGUGC 3' | Hesslberth et al. "Simultaneous Detection of Diverse Analytes with an Aptazyme Ligase Array." Analytical Biochemistry, 312, (2003):106-112. |
374 | Terminal 8-oxodG DNA Lesion (R10-B35) (ID# 488) | Small Organic | DNA Lesion 7,8-dihydro-8-hydroxy-2'-deoxyguanosine (8-oxodG) | 78 | 5 µM | Binding buffer: 20 mM NH4CH3CO2(pH 6.0), 300 mM NaCl, and 5 mM MgCl2. | 50.00% | 5' GGGCGAAUUCCCGAGGACCAAAUAGUACCACCCGGGAAAACAGCUAAUGCCGAAACGGAGAUUUUUUCUGCAGAAGCU 3' | Rink, S. M. et al. "Creation of RNA molecules that recognize the oxidative lesion 7,8-dihydro-8-hydroxy-2*-deoxyguanosine (8-oxodG) in DNA." Proc. Natl. Acad. Sci., 95 (1998):11619-11624. |
375 | ATP C20 (ID# 572) | Small Organic | ATP | 78 | 39 µM | (50 mM TrisHCl, pH 7.5, 150 mM NaCl, 5 mM MgCl2) + 1 mg/ml tRNA and 0.1 mg/ml BSA | 53.33% | Weill L., Louis D., and Sargueil B., 2004.Selection and Evolution of NTP-Specific Aptamers. Nucleic Acids Research, 2004 Vol. 32 No. 17, 5045-5058 | |
376 | 2F11-14 (ID# 581) | Protein | Ebola virus inhibitory domain (eVP35 IID) (EBOV) (eVP35) | 78 | 7.1 nM | 10mM HEPES (pH 7.0), 150mM NaCl, 2mM TCEP (tris(2-carboxyethyl)phosphine), 1mM MgCl2 | 56.41% | Jennifer M. Binning, Tianjiao Wang, Priya Luthra, Reed S. Shabman, Dominika M. Borek, Gai Liu, Wei Xu, Daisy W. Leung, Christopher F. Basler, and Gaya K. Amarasinghe, ??Development of RNA aptamers targeting ebolavirus VP35? Biochemistry 2013, 52, 8406-8419. | |
377 | HER3 (A30) (ID# 62) | Protein | HER3 | 79 | 45 nM | Binding buffer: 10 mM HEPES (pH 7.4), 100 mM NaCl, and 2.5 mM MgCl2 | 59.49% | 5' GAAUUCCGCGUGUGCCAGCGAAAGUUGCGUAUGGGUCACAUCGCAGGCACAUGUCAUCUGGGCGGUCCGUUCGGGAUCC 3' | Chi-Hong et al. "Inhibition of heregulin signaling by an aptamer that preferentially binds to the oligomeric form of human epidermal growth factor receptor-3." Proceedings of the National Academy of Sciences of the United States of America 100,(2003):9226-9231. |
378 | Lysozyme (ID# 162) | Protein | Lysozyme | 79 | 31 nM | Selection Buffer (20 mM Tris (pH 7.5) 100 mM NaCl,5 mM MgCl2) | 45.57% | 5' GGGAAUGGAUCCACAUCUACGAAUUCAUCAGGGCUAAAGAGGCAGAGUUACUUAGUUCACUGCAGACUUGACGAAGCUU 3' | Cox and Ellington. "Automated Selection of Anti-Protein Aptamers." Bioorganic & Medicinal Chemsitry, 9 (2001): 2525-2531/ |
379 | Heteroaryl dihydropyrimidine (Aptamer 21) (ID# 201) | Small Organic | Heteroaryldihydropyrimidine (HAP) | 79 | 50 nM | Selection buffer: 150 mM NaCl, 5 mM MgCl2, and 50 mM HEPES (pH 7.4) | 56.96% | 5' GGGUAGGCCAGGCAGCCAACUAGCGAGAGCUUAAAUCUCUGAGCCCGAGAGGGUUCAGUGCUGCUUAUGUGGACGGCUU 3' | Lau et al. "Evolution and Protein Packaging of Small-Molecule RNA Aptamers." ACS NANO, 5(2011): 7722-7729. |
380 | Mouse Transferrin Receptor (FB4) (ID# 451) | Protein | Mouse Transferrin Receptor (mTfR) | 79 | N/A nM | RNA binding buffer (20 mM NaPO4, pH 7.4/120 mM NaCl/2.5 mM KCl/0.12 mM MgSO4/40 mM Hepes, pH 7.4) | 62.03% | 5' GGGCGAAUUCCGCGUGUGCUGAGGGCGGAAGAACUAAUUUGGGACGGAUUGCGGCCGUUGUCUGUGGCGUCCGUUCGGG 3' | E F Neufeld et al. Aptamer-based endocytosis of a lysosomal enzyme. Proc. Natl. Acad. Sci. USA 105(2008): 15908-15913 |