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# | Aptamer Name | Aptamer Target (General) | Aptamer Target (Specific) | Length | Affinity | Buffer | GC Content | Sequence | Reference |
---|---|---|---|---|---|---|---|---|---|
51 | Human Norovirus SMV-19 | Other | Human Norovirus | 81 | 191 nM | 500 ml of binding buffer [consisting of phosphate buffered saline (pH 7.1) supplemented with 100 mg/L CaCl2, 100 mg/L MgCl2 and 0.05% Tween 20] at Room Temperature | 46.91% | 5’-AGTATACGTATTACCTGCAGCCACCAGTGTGTTGAGGTTTGAGCACACTGATAGAGTGTCACGATATCTCGGAGATCTTGC-3’ | Escudero-Abarca BI, Suh SH, Moore MD, Dwivedi HP, Jaykus L-A (2014) Selection, Characterization and Application of Nucleic Acid Aptamers for the Capture and Detection of Human Norovirus Strains. PLoS ONE 9(9): e106805. doi:10.1371/journal.pone.0106805 |
52 | Human Norovirus SMV-21 | Other | Human Norovirus | 81 | 101 nM | 500 ml of binding buffer [consisting of phosphate buffered saline (pH 7.1) supplemented with 100 mg/L CaCl2, 100 mg/L MgCl2 and 0.05% Tween 20] at Room Temperature | 43.21% | 5’-AGTATACGTATTACCTGCAGCCCATGTTTTGTAGGTGTAATAGGTCATGTTAGGGTTTCTGCGATATCTCGGAGATCTTGC-3’ | Escudero-Abarca BI, Suh SH, Moore MD, Dwivedi HP, Jaykus L-A (2014) Selection, Characterization and Application of Nucleic Acid Aptamers for the Capture and Detection of Human Norovirus Strains. PLoS ONE 9(9): e106805. doi:10.1371/journal.pone.0106805 |
53 | Human Norovirus SMV-25 | Other | Human Norovirus | 81 | 232 nM | 500 ml of binding buffer [consisting of phosphate buffered saline (pH 7.1) supplemented with 100 mg/L CaCl2, 100 mg/L MgCl2 and 0.05% Tween 20] at Room Temperature | 43.21% | 5’-AGTATACGTATTACCTGCAGCCATCTGTGTGAAGACTATATGGCGCTCACATATTTCTTTCCGATATCTCGGAGATCTTGC-3’ | Escudero-Abarca BI, Suh SH, Moore MD, Dwivedi HP, Jaykus L-A (2014) Selection, Characterization and Application of Nucleic Acid Aptamers for the Capture and Detection of Human Norovirus Strains. PLoS ONE 9(9): e106805. doi:10.1371/journal.pone.0106805 |
54 | Aptamer 25 | Other | Human norovirus (SMV-VLP) | 81 | 232 nM | Phosphate buffered saline (pH 7.1) supplemented with 100 mg/L CaCl2, 100 mg/L MgCl2 and 0.05% Tween 20 | 43.21% | 5’-AGTATACGTATTACCTGCAGCCATCTGTGTGAAGACTATATGGCGCTCACATATTTCTTTCCGATATCTCGGAGATCTTGC-3’ | Escudero-Abarca BI, Suh SH, Moore MD, Dwivedi HP, Jaykus L-A (2014) Selection, Characterization and Application of Nucleic Acid Aptamers for the Capture and Detection of Human Norovirus Strains. PLoS ONE 9(9): e106805. doi:10.1371/journal.pone.0106805 |
55 | Bovine Catalase (CAT 1) | Protein | Bovine Catalase | 82 | 237 nM | CE Selection Buffer (1X TGK): 25 mM Tris, 192 mM glycine, 5 mM potassium phosphate buffer (pH 8.3). | 60.98% | 5'-CTTCTGCCCGCCTCCTTCCGACCTAGCAGTGGACATGTGGCAGGGTGAAGTGGCATCGTCGGAGACGAGATAGGCGGACACT-3’ | Ashley, J. et al. Selection of bovine catalase aptamers using non-selex. Electrophoresis 33(2012):2783-2789 |
56 | Hepatitis C Virus RdRp | Protein | Hepatitis C Virus RdRp | 83 | 1.3 nM | Binding buffer: HEPES-buffered saline containing 1 mM CaCl2, 2.7 mM MgCl2, and 0.005% surfactant P-20 (HBS-CKM) | 53.01% | 5'-GGGAGACAAGAATAAACGCTCAAGGGCGTGGTGGGTGGGGTACTAATAATGTGCGTTTGTTCGACAGGAGGCTCACAACAGGC-3' | Jones et al. "High-Affinity Aptamers to Subtype 3a Hepatitis C Virus Polymerase Display Genotypic Specificity." Antimicrobial Agents and Chemotherapy, 50 (2006): 3019-3027 |
57 | Vaccinia virus–infected A549 cells | Cells | Vaccinia virus (WR Strain)–infected A549 cells | 83 | 2.7 nM | Binding Buffer: Dulbecco PBS, 4.5g/L glucose, 5 mmol/L MgCl2, 0.1 g/L yeast tRNA, 100 mL/L FBS, and 1 g/L BSA. | 45.78% | 5'-ATCGTCTGCTCCGTCCAATATGATGACACCTGCATAATTTATAGTGAGTCTTGATTCACGCTGCATTTGGTGTGAGGTCGTGC-3’ | Tang et al. "Generating Aptamers for Recognition of Virus-Infected Cells." Clin. Chem., 55(2009): 813-822. |
58 | Anti Glioblastoma Cells (GBM128) | Cells | Glioblastoma Cell | 83 | 20 nM | 25 µM glucose 4 µM yeast tRNA 15 µM BSA 5 mM MgCl2 in PBS (pH = 7.4) 1 hour incubation with cells | 49.40% | 5'-GAATTCAGTCGGACAGCGACGGTGGGAGCCCCAAATAATTCTTGCGATTATTAGTGTAAGCGGATGGACGAATATCGTCTCCC-3’ | Kang et al. Selection of DNA Aptamers against Glioblastoma Cells with High Affinity and Specificity (PLOSone |
59 | GBM128 | Cells | Glioblastoma | 83 | 20 nM | The washing buffer (WB) used contained 4.5 g/L glucose, and 5 mM MgCl2 in PBS (pH = 7.4). The binding buffer used during selection was prepared by adding yeast tRNA (0.1 mg/mL) and BSA (1 mg/mL) to washing buffer to reduce background binding. | 49.40% | 5'-GAATTCAGTCGGACAGCGACGGTGGGAGCCCCAAATAATTCTTGCGATTATTAGTGTAAGCGGATGGACGAATATCGTCTCCC-3’ | Kang et al. Selection of DNA Aptamers against Glioblastoma Cells with High Affinity and Specificity (PLOSone |
60 | Aptamer TY04 | Cells | Multiple myeloma cells (MM.1S | 83 | 3.89 µM | yeast tRNA (0.1mg/ml; Sigma) and BSA (1 mg/ml; Sigma) into the wash buffer | 45.78% | 5'-ATCGTCTGCTCCGTCCAATATATCAAAGGCGAATTTTGTCAAGGTGTTAAACGATAGTCCCTACCTTTGGTGTGAGGTCGTGC-3’ | Dai, H. et al. "Aptamer TY04 inhibits the growth of multiple myeloma cells via cell cycle arrest." Tumor Biology 2014: 1-8 |